# WARNING: This is an automatically generated file and will be overwritten
#          by CellBlender on the next model export.

# File uses standard MCell units for bimolecular reactions (M^-1*s^-1 and um^2*N^-1*s^-1).
# When used with MCell, global option Model.config.use_bng_units must be set to False.
# WARNING: Simulation with BioNetGen won't produce correct results because BioNetGen uses different units than MCell.

begin parameters
    reaction_rate 3e8

end parameters

begin molecule types
    V
    S
end molecule types

begin compartments
    # Note: Compartments are defined for MCell in Python using class GeometryObject,
    #       MCell ignores the volume/area set here
    OM_SA 2 24 * 0.01 Cube # volume = area * 0.01 um thickness
    IMS 3 4.99177265110159 OM_SA
    Cube 3 56 
    IM_SA 2 12.5033106218884 * 0.01 IMS # volume = area * 0.01 um thickness
    M 3 3.00822734889841 IM_SA
end compartments

begin reaction rules
    V@IMS + S@IM_SA -> S@IM_SA + V@M reaction_rate
end reaction rules